Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylalanine--trna ligase subunit beta | BK659_14270 | Not Available | Positive | 3213590 - 3215968 | 86636.0 |
| integration host factor subunit alpha | BK659_14275 | Not Available | Positive | 3215972 - 3216274 | 11476.8 |
| merr family transcriptional regulator | BK659_14280 | Not Available | Positive | 3216255 - 3216611 | 13921.0 |
| Trna-pro | Not Available | Not Available | Positive | 3216701 - 3216777 | Not Available |
| dna helicase | BK659_14290 | Not Available | Positive | 3217038 - 3223667 | 245528.0 |
| hypothetical protein | BK659_14295 | Not Available | Positive | 3223855 - 3224859 | 37399.7 |
| hypothetical protein | BK659_14300 | Not Available | Negative | 3224835 - 3225050 | 8033.61 |
| amino acid abc transporter substrate-binding protein | BK659_14305 | Not Available | Positive | 3225520 - 3226341 | 29726.4 |
| amino acid abc transporter permease | BK659_14310 | Not Available | Positive | 3226338 - 3227183 | 31035.8 |
| oxidoreductase | BK659_14315 | Not Available | Positive | 3227218 - 3228600 | 51067.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
