Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK659_14170 | Not Available | Negative | 3197322 - 3197573 | 9257.87 |
| l-asparaginase | BK659_14175 | Not Available | Negative | 3197799 - 3198887 | 38841.7 |
| hypothetical protein | BK659_14180 | Not Available | Positive | 3199235 - 3199690 | 15431.3 |
| laci family transcriptional regulator | BK659_14185 | Not Available | Positive | 3199925 - 3200878 | 33340.5 |
| sugar abc transporter atp-binding protein | BK659_14190 | Not Available | Positive | 3200936 - 3202489 | 55363.2 |
| abc transporter permease | BK659_14195 | Not Available | Positive | 3202486 - 3203463 | 33543.8 |
| laci family transcriptional regulator | BK659_14200 | Not Available | Positive | 3203467 - 3204486 | 36597.3 |
| ribokinase | BK659_14205 | Not Available | Positive | 3204510 - 3205427 | 30660.8 |
| d-ribose pyranase | BK659_14210 | Not Available | Positive | 3205424 - 3205828 | 14534.1 |
| nucleoside hydrolase | BK659_14215 | Not Available | Positive | 3205874 - 3206902 | 36979.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
