Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| had family hydrolase | BK659_13810 | Not Available | Negative | 3135321 - 3135974 | 24563.2 |
| hypothetical protein | BK659_13815 | Not Available | Negative | 3136025 - 3136561 | 20466.6 |
| diguanylate cyclase | BK659_13820 | Not Available | Positive | 3136769 - 3138343 | 58051.7 |
| class a beta-lactamase | BK659_13825 | Not Available | Positive | 3138406 - 3139305 | 31709.0 |
| arylamine n-acetyltransferase | BK659_13830 | Not Available | Positive | 3139420 - 3140247 | 31001.0 |
| uracil permease | BK659_13835 | Not Available | Positive | 3140466 - 3141986 | 52451.6 |
| Trna-asn | Not Available | Not Available | Positive | 3142159 - 3142234 | Not Available |
| hypothetical protein | BK659_13845 | Not Available | Positive | 3142487 - 3142720 | 7982.35 |
| hypothetical protein | BK659_13850 | Not Available | Negative | 3142727 - 3142930 | 7459.99 |
| aromatic amino acid aminotransferase | BK659_13855 | Not Available | Negative | 3143163 - 3144359 | 43354.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
