Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aconitate hydratase 1 | BK659_13660 | Not Available | Negative | 3107307 - 3110057 | 99371.2 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | BK659_13665 | Not Available | Positive | 3110280 - 3111353 | 40430.9 |
| sulfurtransferase tusa | BK659_13670 | Not Available | Positive | 3111532 - 3111783 | 9345.43 |
| mate family efflux transporter | BK659_13675 | Not Available | Negative | 3111780 - 3113189 | 49721.3 |
| 4-phosphoerythronate dehydrogenase | BK659_13680 | Not Available | Positive | 3113451 - 3114593 | 41380.5 |
| two-component sensor histidine kinase | BK659_13685 | Not Available | Negative | 3114620 - 3115981 | 49842.9 |
| dna-binding response regulator | BK659_13690 | Not Available | Negative | 3115981 - 3116661 | 25424.9 |
| copper-binding protein | BK659_13695 | Not Available | Positive | 3116817 - 3117350 | 19122.3 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | BK659_13700 | Not Available | Positive | 3117412 - 3118242 | 30738.6 |
| chromosome partitioning protein para | BK659_13705 | Not Available | Negative | 3118415 - 3118678 | 9841.76 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
