Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrite reductase | BK659_13405 | Not Available | Negative | 3041228 - 3041545 | 11387.6 |
| nitrite reductase large subunit | BK659_13410 | Not Available | Negative | 3041542 - 3044010 | 90260.6 |
| protein kinase | BK659_13415 | Not Available | Negative | 3044469 - 3046139 | 61867.1 |
| mfs transporter | BK659_13420 | Not Available | Negative | 3046147 - 3047358 | 42818.9 |
| response regulator | BK659_13425 | Not Available | Negative | 3047698 - 3048273 | 21460.3 |
| nitrate transporter | BK659_13430 | Not Available | Negative | 3048289 - 3049500 | 44050.4 |
| dihydroorotate dehydrogenase (quinone) | BK659_13435 | Not Available | Positive | 3049748 - 3050767 | 35798.5 |
| 23s rrna (guanine(2445)-n(2))/(guanine(2069)-n(7))- methyltransferase | BK659_13440 | Not Available | Positive | 3051771 - 3054041 | 85268.1 |
| ggdef domain-containing protein | BK659_13445 | Not Available | Positive | 3054180 - 3056579 | 88603.2 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | BK659_13450 | Not Available | Negative | 3056716 - 3058176 | 52299.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
