Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | BK659_13355 | Not Available | Positive | 3031750 - 3032739 | 36442.4 |
| rieske iron-sulfur protein | BK659_13360 | Not Available | Positive | 3032840 - 3033139 | 10800.3 |
| ribonuclease activity regulator protein rraa | BK659_13365 | Not Available | Positive | 3033229 - 3033720 | 17677.2 |
| zinc transporter zntb | BK659_13370 | Not Available | Positive | 3033747 - 3034742 | 38152.0 |
| crfx protein | BK659_13375 | Not Available | Positive | 3034806 - 3035051 | 8817.55 |
| transporter | BK659_13380 | Not Available | Positive | 3035054 - 3035878 | 29046.6 |
| rna polymerase subunit sigma | BK659_13385 | Not Available | Positive | 3035993 - 3036559 | 22446.0 |
| porin | BK659_13390 | Not Available | Positive | 3036667 - 3037641 | 34723.3 |
| uroporphyrinogen-iii c-methyltransferase | BK659_13395 | Not Available | Negative | 3037727 - 3038500 | 27454.3 |
| nitrate reductase | BK659_13400 | Not Available | Negative | 3038511 - 3041228 | 98812.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
