Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK659_13105 | Not Available | Positive | 2984127 - 2984732 | 22135.4 |
| hypothetical protein | BK659_13110 | Not Available | Positive | 2984871 - 2985107 | 8821.48 |
| superfamily ii dna/rna helicase, snf2 family protein | BK659_13115 | Not Available | Positive | 2985319 - 2985660 | 12704.9 |
| hypothetical protein | BK659_13120 | Not Available | Positive | 2985962 - 2987371 | 52485.9 |
| hypothetical protein | BK659_13125 | Not Available | Positive | 2987384 - 2988334 | 35660.5 |
| transglutaminase | BK659_13130 | Not Available | Positive | 2988331 - 2989134 | 30273.7 |
| cytochrome c | BK659_13135 | Not Available | Negative | 2989257 - 2990063 | 29353.3 |
| acetyl-coa acetyltransferase | BK659_13140 | Not Available | Positive | 2990669 - 2991874 | 42118.9 |
| 3-hydroxyacyl-coa dehydrogenase | BK659_13145 | Not Available | Positive | 2991900 - 2994044 | 76277.5 |
| amidotransferase | BK659_13150 | Not Available | Positive | 2994152 - 2994880 | 27379.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
