Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| potassium-transporting atpase subunit kdpa | BK659_12955 | Not Available | Positive | 2954675 - 2956447 | 62353.1 |
| potassium-transporting atpase subunit b | BK659_12960 | Not Available | Positive | 2956458 - 2958536 | 73339.9 |
| potassium-transporting atpase subunit c | BK659_12965 | Not Available | Positive | 2958549 - 2959121 | 19860.1 |
| two-component system sensor histidine kinase kdbd | BK659_12970 | Not Available | Positive | 2959144 - 2961843 | 98479.2 |
| dna-binding response regulator | BK659_12975 | Not Available | Positive | 2961840 - 2962529 | 25772.4 |
| damage-inducible protein dinb | BK659_12980 | Not Available | Positive | 2962621 - 2963163 | 20415.3 |
| redoxin | BK659_12985 | Not Available | Negative | 2963276 - 2963779 | 18912.0 |
| hypothetical protein | BK659_12990 | Not Available | Negative | 2963866 - 2964891 | 36787.1 |
| hypothetical protein | BK659_12995 | Not Available | Negative | 2964977 - 2965297 | 11230.7 |
| duf1289 domain-containing protein | BK659_13000 | Not Available | Negative | 2965596 - 2965778 | 6874.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
