Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidyl-arginine deiminase | BK659_12905 | Not Available | Negative | 2945100 - 2946152 | 38206.3 |
| lysr family transcriptional regulator | BK659_12910 | Not Available | Positive | 2946287 - 2947159 | 32166.3 |
| hypothetical protein | BK659_12915 | Not Available | Positive | 2947364 - 2948005 | 23512.1 |
| hypothetical protein | BK659_12920 | Not Available | Positive | 2948027 - 2948524 | 16604.4 |
| alpha/beta hydrolase | BK659_12925 | Not Available | Positive | 2948529 - 2949257 | 26419.5 |
| hypothetical protein | BK659_12930 | Not Available | Positive | 2950608 - 2951255 | 23181.8 |
| hypothetical protein | BK659_12935 | Not Available | Negative | 2951536 - 2952198 | 24106.9 |
| atpase | BK659_12940 | Not Available | Negative | 2952203 - 2953495 | 48597.9 |
| hypothetical protein | BK659_12945 | Not Available | Negative | 2953782 - 2954054 | 9945.11 |
| potassium-transporting atpase subunit f | BK659_12950 | Not Available | Positive | 2954586 - 2954678 | 3236.11 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
