Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | BK659_12805 | Not Available | Negative | 2922631 - 2923485 | 31096.8 |
| fmn-dependent nadh-azoreductase | BK659_12810 | Not Available | Positive | 2923593 - 2924234 | 24195.0 |
| reactive intermediate/imine deaminase | BK659_12815 | Not Available | Negative | 2924352 - 2924732 | 13379.1 |
| lysr family transcriptional regulator | BK659_12820 | Not Available | Negative | 2924842 - 2925774 | 33775.0 |
| mfs transporter | BK659_12825 | Not Available | Positive | 2925916 - 2927373 | 49631.4 |
| hypothetical protein | BK659_12830 | Not Available | Positive | 2927703 - 2928554 | 30442.1 |
| hypothetical protein | BK659_12835 | Not Available | Positive | 2928700 - 2928912 | 7790.28 |
| glutathione s-transferase | BK659_12840 | Not Available | Positive | 2929055 - 2929735 | 26382.5 |
| malate:quinone oxidoreductase | BK659_12845 | Not Available | Negative | 2930417 - 2932066 | 60307.2 |
| diguanylate cyclase | BK659_12850 | Not Available | Negative | 2932433 - 2933908 | 54752.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
