Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarylacetoacetate hydrolase | BK659_12645 | Not Available | Negative | 2888443 - 2889399 | 35105.4 |
| glyoxalase | BK659_12650 | Not Available | Negative | 2889483 - 2890574 | 40729.9 |
| tetr family transcriptional regulator | BK659_12655 | Not Available | Negative | 2890663 - 2891277 | 22608.9 |
| 2,4-dienoyl-coa reductase | BK659_12660 | Not Available | Positive | 2891642 - 2892877 | 44488.7 |
| tetr family transcriptional regulator | BK659_12665 | Not Available | Negative | 2892900 - 2893544 | 23263.2 |
| 3-(3-hydroxyphenyl)propionate hydroxylase | BK659_12670 | Not Available | Negative | 2893547 - 2895205 | 61232.4 |
| transcriptional regulator | BK659_12675 | Not Available | Positive | 2895546 - 2898443 | 106828.0 |
| hypothetical protein | BK659_12680 | Not Available | Positive | 2898699 - 2898914 | 7632.95 |
| rnd transporter | BK659_12685 | Not Available | Positive | 2899032 - 2900537 | 53039.9 |
| efflux transporter periplasmic adaptor subunit | BK659_12690 | Not Available | Positive | 2900568 - 2901680 | 39349.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
