Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m14 | BK659_12595 | Not Available | Positive | 2878693 - 2879805 | 40414.6 |
| histidine/lysine/arginine/ornithine abc transporter atp-binding protein | BK659_12600 | Not Available | Positive | 2879824 - 2880588 | 28110.3 |
| rpir family transcriptional regulator | BK659_12605 | Not Available | Positive | 2880854 - 2881762 | 32119.9 |
| branched-chain amino acid abc transporter | BK659_12610 | Not Available | Negative | 2881772 - 2882086 | 11935.2 |
| branched-chain amino acid abc transporter permease | BK659_12615 | Not Available | Negative | 2882083 - 2882781 | 24733.7 |
| phosphatidylcholine synthase | BK659_12620 | Not Available | Positive | 2883083 - 2883802 | 26741.5 |
| hypothetical protein | BK659_12625 | Not Available | Positive | 2883814 - 2884212 | 14811.8 |
| isochorismatase | BK659_12630 | Not Available | Positive | 2884290 - 2884910 | 22002.7 |
| long-chain fatty acid transport protein | BK659_12635 | Not Available | Negative | 2885061 - 2886380 | 46954.4 |
| acyl-coa synthetase | BK659_12640 | Not Available | Negative | 2886542 - 2888443 | 69271.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
