Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | BK659_12545 | Not Available | Negative | 2869278 - 2870159 | 32390.6 |
| succinyl-coa--3-ketoacid-coa transferase | BK659_12550 | Not Available | Positive | 2870306 - 2871004 | 25092.2 |
| succinyl-coa--3-ketoacid-coa transferase | BK659_12555 | Not Available | Positive | 2871036 - 2871695 | 23353.5 |
| acetyl-coa acetyltransferase | BK659_12560 | Not Available | Positive | 2871719 - 2872900 | 40578.1 |
| tyrosyl-trna synthetase | BK659_12565 | Not Available | Negative | 2873025 - 2873567 | 18830.0 |
| sam-dependent methyltransferase | BK659_12570 | Not Available | Positive | 2874111 - 2875157 | 37556.5 |
| hypothetical protein | BK659_12575 | Not Available | Negative | 2875218 - 2876003 | 27554.7 |
| abc transporter substrate-binding protein | BK659_12580 | Not Available | Positive | 2876319 - 2877095 | 28011.3 |
| abc transporter | BK659_12585 | Not Available | Positive | 2877281 - 2877970 | 24662.7 |
| amino acid abc transporter permease | BK659_12590 | Not Available | Positive | 2877988 - 2878683 | 25891.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
