Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ligase | BK659_12445 | Not Available | Positive | 2845612 - 2847138 | 56389.6 |
| glycosyl hydrolase family 5 | BK659_12450 | Not Available | Positive | 2847144 - 2849822 | 98665.5 |
| udp-glucose 4-epimerase gale | BK659_12455 | Not Available | Positive | 2849910 - 2850887 | 35517.2 |
| protein tyrosine kinase | BK659_12460 | Not Available | Negative | 2850932 - 2851681 | 27503.5 |
| lipopolysaccharide biosynthesis protein | BK659_12465 | Not Available | Negative | 2851750 - 2853312 | 58404.2 |
| hypothetical protein | BK659_12470 | Not Available | Negative | 2853333 - 2854448 | 40530.9 |
| sugar abc transporter substrate-binding protein | BK659_12475 | Not Available | Negative | 2854475 - 2855032 | 19609.0 |
| hypothetical protein | BK659_12480 | Not Available | Negative | 2855068 - 2855394 | 11867.8 |
| hypothetical protein | BK659_12485 | Not Available | Positive | 2855707 - 2856501 | 29106.1 |
| hypothetical protein | BK659_12490 | Not Available | Positive | 2857135 - 2858475 | 48298.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
