Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anti-sigma factor | BK659_12345 | Not Available | Positive | 2823642 - 2824400 | 28207.4 |
| hypothetical protein | BK659_12350 | Not Available | Negative | 2824882 - 2825466 | 20649.7 |
| iron abc transporter permease | BK659_12355 | Not Available | Negative | 2825595 - 2826683 | 39676.5 |
| abc transporter permease | BK659_12360 | Not Available | Negative | 2826673 - 2829150 | 89848.5 |
| abc transporter atp-binding protein | BK659_12365 | Not Available | Negative | 2829152 - 2829820 | 24282.3 |
| hypothetical protein | BK659_12370 | Not Available | Positive | 2830353 - 2830535 | 6970.23 |
| hypothetical protein | BK659_12375 | Not Available | Positive | 2830682 - 2830969 | 10281.6 |
| undecaprenyl-phosphate glucose phosphotransferase | BK659_12380 | Not Available | Positive | 2831004 - 2832425 | 53438.8 |
| hypothetical protein | BK659_12385 | Not Available | Positive | 2832482 - 2833624 | 43583.9 |
| hypothetical protein | BK659_12390 | Not Available | Positive | 2833709 - 2834815 | 41504.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
