Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-binding monooxygenase | BK659_12295 | Not Available | Positive | 2812469 - 2814232 | 65649.7 |
| polyketide synthase | BK659_12300 | Not Available | Positive | 2814350 - 2815441 | 39395.7 |
| polyketide synthase | BK659_12305 | Not Available | Positive | 2815524 - 2818940 | 122638.0 |
| polyketide cyclase | BK659_12310 | Not Available | Positive | 2819000 - 2819476 | 17877.8 |
| autotransporter outer membrane beta-barrel domain-containing protein | BK659_12315 | Not Available | Positive | 2819561 - 2820259 | 25629.3 |
| hypothetical protein | BK659_12320 | Not Available | Positive | 2820584 - 2820871 | 10332.4 |
| hypothetical protein | BK659_12325 | Not Available | Positive | 2820896 - 2821171 | 10084.1 |
| amidase | BK659_12330 | Not Available | Negative | 2821682 - 2822002 | 11935.5 |
| metallophosphoesterase | BK659_12335 | Not Available | Negative | 2822016 - 2822987 | 34996.5 |
| rna polymerase subunit sigma | BK659_12340 | Not Available | Positive | 2823137 - 2823649 | 19416.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
