Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase adra | BK659_12245 | Not Available | Negative | 2797917 - 2798990 | 39293.5 |
| glycolate oxidase subunit glcd | BK659_12250 | Not Available | Positive | 2799472 - 2800971 | 53613.8 |
| glycolate oxidase subunit glce | BK659_12255 | Not Available | Positive | 2800971 - 2802029 | 38067.4 |
| glycolate oxidase iron-sulfur subunit | BK659_12260 | Not Available | Positive | 2802033 - 2803250 | 44052.1 |
| duf1338 domain-containing protein | BK659_12265 | Not Available | Positive | 2803361 - 2804758 | 51863.5 |
| hypothetical protein | BK659_12270 | Not Available | Negative | 2804844 - 2807654 | 104550.0 |
| tetr family transcriptional regulator | BK659_12275 | Not Available | Negative | 2808031 - 2808627 | 22005.3 |
| oxidoreductase | BK659_12280 | Not Available | Positive | 2809250 - 2810263 | 37675.4 |
| amp-dependent synthetase | BK659_12285 | Not Available | Positive | 2810344 - 2811864 | 55699.4 |
| haloacid dehalogenase | BK659_12290 | Not Available | Positive | 2811854 - 2812465 | 23051.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
