Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK659_12145 | Not Available | Negative | 2773959 - 2774162 | 7084.43 |
| chemotaxis protein | BK659_12150 | Not Available | Negative | 2774298 - 2775908 | 57826.6 |
| conjugal transfer protein trar | BK659_12155 | Not Available | Negative | 2776144 - 2776548 | 15471.2 |
| porin | BK659_12160 | Not Available | Negative | 2776874 - 2778244 | 50270.7 |
| abc transporter | BK659_12165 | Not Available | Negative | 2778424 - 2779446 | 35524.6 |
| d-xylose abc transporter atp-binding protein | BK659_12170 | Not Available | Negative | 2779516 - 2781081 | 56972.8 |
| rhizopine-binding protein | BK659_12175 | Not Available | Negative | 2781152 - 2782078 | 33350.3 |
| oxidoreductase | BK659_12180 | Not Available | Negative | 2782433 - 2783485 | 38170.3 |
| protein iolh | BK659_12185 | Not Available | Negative | 2783630 - 2784490 | 32985.3 |
| inositol 2-dehydrogenase | BK659_12190 | Not Available | Negative | 2784615 - 2785625 | 36497.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
