Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion protein | BK659_11935 | Not Available | Positive | 2721533 - 2722558 | 37038.7 |
| clpv1 family t6ss atpase | BK659_11940 | Not Available | Positive | 2722561 - 2725110 | 92723.5 |
| hypothetical protein | BK659_11945 | Not Available | Positive | 2725178 - 2725540 | 12952.3 |
| hypothetical protein | BK659_11950 | Not Available | Positive | 2725665 - 2726282 | 22588.8 |
| type iv secretion protein rhs | BK659_11955 | Not Available | Positive | 2726351 - 2728360 | 72681.0 |
| hypothetical protein | BK659_11960 | Not Available | Positive | 2728374 - 2728916 | 20526.3 |
| hypothetical protein | BK659_11965 | Not Available | Negative | 2729252 - 2729644 | 13193.9 |
| phosphotransferase family protein | BK659_11970 | Not Available | Positive | 2729834 - 2730901 | 40586.6 |
| short-chain dehydrogenase | BK659_11975 | Not Available | Positive | 2730940 - 2731707 | 26826.4 |
| fluoroquinolone resistance protein | BK659_11980 | Not Available | Negative | 2732028 - 2732672 | 23985.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
