Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h:quinone oxidoreductase, type iv | BK659_11785 | Not Available | Positive | 2686538 - 2687140 | 20851.0 |
| cystathionine beta-synthase | BK659_11790 | Not Available | Positive | 2687342 - 2688718 | 49652.4 |
| cystathionine beta-lyase | BK659_11795 | Not Available | Positive | 2688715 - 2689893 | 42500.0 |
| hypothetical protein | BK659_11800 | Not Available | Positive | 2689961 - 2690908 | 35492.6 |
| lysr family transcriptional regulator | BK659_11805 | Not Available | Negative | 2690980 - 2691897 | 33756.1 |
| mfs transporter | BK659_11810 | Not Available | Positive | 2692076 - 2693404 | 47547.2 |
| coa transferase | BK659_11815 | Not Available | Positive | 2693439 - 2694695 | 44956.7 |
| methylmalonyl-coa decarboxylase | BK659_11820 | Not Available | Positive | 2694692 - 2695492 | 28885.9 |
| cytochrome c family protein | BK659_11825 | Not Available | Negative | 2695613 - 2696002 | 13925.7 |
| phospholipid-binding protein | BK659_11830 | Not Available | Negative | 2696265 - 2696618 | 12951.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
