Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit epsilon | BK654_03875 | Not Available | Negative | 945233 - 945994 | 27569.5 |
| ribonuclease hi | BK654_03880 | Not Available | Negative | 946227 - 946679 | 16878.1 |
| sam-dependent methyltransferase | BK654_03885 | Not Available | Negative | 946768 - 947526 | 28070.0 |
| hydroxyacylglutathione hydrolase | BK654_03890 | Not Available | Positive | 947592 - 948359 | 28037.1 |
| lytic transglycosylase | BK654_03895 | Not Available | Positive | 948459 - 949907 | 54077.6 |
| abc transporter substrate-binding protein | BK654_03900 | Not Available | Positive | 950183 - 952015 | 69828.5 |
| hypothetical protein | BK654_03905 | Not Available | Positive | 952012 - 953868 | 70434.0 |
| microcin abc transporter permease | BK654_03910 | Not Available | Positive | 953873 - 954946 | 39450.7 |
| abc transporter permease | BK654_03915 | Not Available | Positive | 954948 - 955967 | 37851.6 |
| microcin abc transporter atp-binding protein | BK654_03920 | Not Available | Positive | 955969 - 957579 | 59294.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
