Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mbl fold metallo-hydrolase | BK659_11385 | Not Available | Positive | 2582826 - 2583710 | 31399.9 |
| 3-beta hydroxysteroid dehydrogenase | BK659_11390 | Not Available | Positive | 2583759 - 2584373 | 21538.8 |
| hypothetical protein | BK659_11395 | Not Available | Positive | 2584834 - 2586096 | 47209.8 |
| hypothetical protein | BK659_11400 | Not Available | Positive | 2586130 - 2587152 | 38590.2 |
| lysr family transcriptional regulator | BK659_11405 | Not Available | Negative | 2587223 - 2588122 | 33276.1 |
| hypothetical protein | BK659_11410 | Not Available | Positive | 2588282 - 2589919 | 57449.9 |
| aldehyde dehydrogenase | BK659_11415 | Not Available | Positive | 2589916 - 2591364 | 51291.4 |
| spermidine/putrescine abc transporter substrate-binding protein | BK659_11420 | Not Available | Positive | 2591581 - 2592684 | 39965.8 |
| abc transporter permease | BK659_11425 | Not Available | Positive | 2592881 - 2593789 | 32485.4 |
| abc transporter permease | BK659_11430 | Not Available | Positive | 2593786 - 2594634 | 30468.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
