Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine transporter lyse | BK659_11335 | Not Available | Negative | 2573470 - 2574072 | 21271.4 |
| acetyltransferase | BK659_11340 | Not Available | Negative | 2574078 - 2574479 | 14310.0 |
| transcriptional regulator argp | BK659_11345 | Not Available | Positive | 2574575 - 2575468 | 32847.9 |
| 3-beta hydroxysteroid dehydrogenase | BK659_11350 | Not Available | Positive | 2575540 - 2576538 | 37016.6 |
| atpase | BK659_11355 | Not Available | Positive | 2576645 - 2577481 | 30298.4 |
| mfs transporter | BK659_11360 | Not Available | Negative | 2577618 - 2579135 | 53970.7 |
| 4-hydroxybenzoate 3-monooxygenase | BK659_11365 | Not Available | Negative | 2579214 - 2580407 | 44296.1 |
| arac family transcriptional regulator | BK659_11370 | Not Available | Positive | 2580585 - 2581481 | 33846.6 |
| hypothetical protein | BK659_11375 | Not Available | Negative | 2581491 - 2581685 | 7171.71 |
| lysr family transcriptional regulator | BK659_11380 | Not Available | Negative | 2581805 - 2582692 | 32638.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
