Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component sensor histidine kinase | BK659_11285 | Not Available | Positive | 2558451 - 2559731 | 47486.6 |
| hypothetical protein | BK659_11290 | Not Available | Positive | 2559837 - 2560067 | 8152.18 |
| multidrug efflux protein | BK659_11295 | Not Available | Negative | 2560251 - 2563277 | 109717.0 |
| efflux transporter periplasmic adaptor subunit | BK659_11300 | Not Available | Negative | 2563293 - 2564444 | 41106.2 |
| hypothetical protein | BK659_11305 | Not Available | Negative | 2564750 - 2565847 | 39953.8 |
| imelysin | BK659_11310 | Not Available | Negative | 2565862 - 2566926 | 38652.1 |
| thiol oxidoreductase | BK659_11315 | Not Available | Negative | 2566984 - 2568411 | 51115.5 |
| peptidase | BK659_11320 | Not Available | Negative | 2568680 - 2570020 | 47100.9 |
| ggdef-domain containing protein | BK659_11325 | Not Available | Negative | 2570311 - 2572362 | 77279.0 |
| superoxide dismutase | BK659_11330 | Not Available | Negative | 2572697 - 2573293 | 22005.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
