Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transporter rnfb | BK659_11235 | Not Available | Negative | 2547634 - 2548848 | 43728.6 |
| nadh:quinone oxidoreductase | BK659_11240 | Not Available | Negative | 2548845 - 2549414 | 20512.9 |
| methionine--trna ligase | BK659_11245 | Not Available | Negative | 2549526 - 2551577 | 75888.3 |
| mrp family atp-binding protein | BK659_11250 | Not Available | Positive | 2551909 - 2553003 | 38391.6 |
| 3-oxoacyl-acp reductase | BK659_11255 | Not Available | Negative | 2553073 - 2553831 | 26898.9 |
| heme iron utilization protein | BK659_11260 | Not Available | Positive | 2553997 - 2554728 | 27159.4 |
| membrane protein fxsa | BK659_11265 | Not Available | Positive | 2554795 - 2555271 | 17345.9 |
| co-chaperone groes | BK659_11270 | Not Available | Positive | 2555518 - 2555811 | 10198.3 |
| chaperonin grol | BK659_11275 | Not Available | Positive | 2555860 - 2557503 | 57178.2 |
| dna-binding response regulator | BK659_11280 | Not Available | Positive | 2557778 - 2558461 | 25382.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
