Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component sensor histidine kinase | BK659_11085 | Not Available | Negative | 2517833 - 2519734 | 70704.6 |
| amino acid abc transporter atp-binding protein | BK659_11090 | Not Available | Negative | 2519898 - 2520632 | 27099.1 |
| amino acid abc transporter permease | BK659_11095 | Not Available | Negative | 2520629 - 2521300 | 24628.2 |
| amino acid abc transporter permease | BK659_11100 | Not Available | Negative | 2521300 - 2522046 | 27735.4 |
| amino acid abc transporter substrate-binding protein | BK659_11105 | Not Available | Negative | 2522239 - 2523153 | 33148.1 |
| glycerol-3-phosphate dehydrogenase | BK659_11110 | Not Available | Negative | 2523603 - 2525141 | 57121.3 |
| deor family transcriptional regulator | BK659_11115 | Not Available | Negative | 2525435 - 2526190 | 27643.3 |
| glycerol kinase | BK659_11120 | Not Available | Negative | 2526286 - 2527791 | 55636.9 |
| aquaporin | BK659_11125 | Not Available | Negative | 2527869 - 2528720 | 29808.9 |
| aminoacyl-trna deacylase | BK659_11130 | Not Available | Positive | 2529091 - 2529561 | 16542.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
