Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | BK659_11035 | Not Available | Negative | 2509121 - 2509984 | 31961.7 |
| aspartate aminotransferase family protein | BK659_11040 | Not Available | Negative | 2509981 - 2511375 | 52113.3 |
| 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | BK659_11045 | Not Available | Negative | 2511368 - 2512090 | 26335.9 |
| structural protein mipa | BK659_11050 | Not Available | Positive | 2512318 - 2513088 | 27061.6 |
| fatty acid desaturase | BK659_11055 | Not Available | Positive | 2513298 - 2514164 | 33404.0 |
| transporter | BK659_11060 | Not Available | Negative | 2514274 - 2514675 | 14235.7 |
| transporter | BK659_11065 | Not Available | Negative | 2514689 - 2515063 | 13393.9 |
| arginase | BK659_11070 | Not Available | Negative | 2515060 - 2515980 | 34865.6 |
| hypothetical protein | BK659_11075 | Not Available | Negative | 2516151 - 2516489 | 12358.8 |
| fis family transcriptional regulator | BK659_11080 | Not Available | Negative | 2516508 - 2517836 | 48788.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
