Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase inhibitor i42 | BK659_10785 | Not Available | Negative | 2439882 - 2440274 | 14030.6 |
| hypothetical protein | BK659_10790 | Not Available | Negative | 2440745 - 2440975 | 8579.07 |
| hypothetical protein | BK659_10795 | Not Available | Negative | 2441240 - 2441977 | 28024.2 |
| endopeptidase la | BK659_10800 | Not Available | Negative | 2442212 - 2444632 | 89482.0 |
| hypothetical protein | BK659_10805 | Not Available | Negative | 2445979 - 2446350 | 13449.7 |
| glucose dehydrogenase | BK659_10810 | Not Available | Negative | 2446756 - 2449167 | 86199.6 |
| porin | BK659_10815 | Not Available | Negative | 2449380 - 2450762 | 50912.0 |
| hypothetical protein | BK659_10820 | Not Available | Positive | 2451223 - 2451453 | 8956.94 |
| hypothetical protein | BK659_10825 | Not Available | Positive | 2451463 - 2452116 | 24540.5 |
| nadph-dependent ferric siderophore reductase | BK659_10830 | Not Available | Negative | 2452312 - 2453097 | 28998.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
