Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exodeoxyribonuclease vii large subunit | BK659_10685 | Not Available | Negative | 2410922 - 2412301 | 51160.2 |
| permease | BK659_10690 | Not Available | Positive | 2412500 - 2413267 | 27312.9 |
| sugar abc transporter atpase | BK659_10695 | Not Available | Positive | 2413456 - 2414004 | 20465.6 |
| imp dehydrogenase | BK659_10700 | Not Available | Positive | 2414233 - 2415702 | 51835.8 |
| glutamine-hydrolyzing gmp synthase | BK659_10705 | Not Available | Positive | 2415784 - 2417361 | 58289.2 |
| transcriptional regulator | BK659_10710 | Not Available | Positive | 2418299 - 2418643 | 12627.4 |
| toxin/anti-toxin system, hipa-like toxin module | BK659_10715 | Not Available | Positive | 2418643 - 2419857 | 45318.1 |
| helicase | BK659_10720 | Not Available | Positive | 2420259 - 2422958 | 101009.0 |
| hypothetical protein | BK659_10725 | Not Available | Negative | 2423198 - 2426260 | 113591.0 |
| trehalose operon repressor | BK659_10730 | Not Available | Negative | 2426397 - 2427101 | 26811.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
