Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cro/cl family transcriptional regulator | BK659_10635 | Not Available | Positive | 2398670 - 2399704 | 35486.3 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | BK659_10640 | Not Available | Positive | 2399708 - 2400817 | 39747.1 |
| histidine--trna ligase | BK659_10645 | Not Available | Positive | 2400840 - 2402129 | 47945.4 |
| gtp-binding protein | BK659_10650 | Not Available | Positive | 2402170 - 2402811 | 22876.0 |
| outer membrane protein assembly factor bamb | BK659_10655 | Not Available | Positive | 2402804 - 2403955 | 41035.0 |
| ribosome biogenesis gtpase der | BK659_10660 | Not Available | Positive | 2404096 - 2405565 | 54746.8 |
| aminotransferase | BK659_10665 | Not Available | Positive | 2405813 - 2406961 | 42328.7 |
| nitrilase family protein | BK659_10670 | Not Available | Positive | 2406949 - 2407740 | 29629.1 |
| 2-isopropylmalate synthase | BK659_10675 | Not Available | Negative | 2407938 - 2409617 | 61756.0 |
| peptidase m23 | BK659_10680 | Not Available | Negative | 2410097 - 2410918 | 29531.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
