Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iscs subfamily cysteine desulfurase | BK659_10585 | Not Available | Positive | 2391149 - 2392363 | 44586.2 |
| fe-s cluster assembly scaffold iscu | BK659_10590 | Not Available | Positive | 2392458 - 2392844 | 13871.7 |
| iron-sulfur cluster assembly protein isca | BK659_10595 | Not Available | Positive | 2392879 - 2393202 | 11528.5 |
| co-chaperone hscb | BK659_10600 | Not Available | Positive | 2393211 - 2393732 | 20223.9 |
| fe-s protein assembly chaperone hsca | BK659_10605 | Not Available | Positive | 2393784 - 2395646 | 66242.4 |
| ferredoxin, 2fe-2s type, isc system | BK659_10610 | Not Available | Positive | 2395650 - 2395991 | 12343.4 |
| fe-s assembly protein iscx | BK659_10615 | Not Available | Positive | 2396006 - 2396206 | 7479.8 |
| nucleoside-diphosphate kinase | BK659_10620 | Not Available | Positive | 2396297 - 2396722 | 15038.8 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase | BK659_10625 | Not Available | Positive | 2396751 - 2397899 | 42271.0 |
| type iv pilus biogenesis/stability protein pilw | BK659_10630 | Not Available | Positive | 2397912 - 2398670 | 28620.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
