Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | BK659_10535 | Not Available | Positive | 2381508 - 2382557 | 38219.8 |
| trna guanosine(34) transglycosylase tgt | BK659_10540 | Not Available | Positive | 2382554 - 2383687 | 41789.7 |
| preprotein translocase subunit yajc | BK659_10545 | Not Available | Positive | 2383732 - 2384067 | 11834.6 |
| protein-export membrane protein secd | BK659_10550 | Not Available | Positive | 2384130 - 2385998 | 67181.4 |
| protein-export membrane protein secf | BK659_10555 | Not Available | Positive | 2386008 - 2386922 | 33216.7 |
| hypothetical protein | BK659_10560 | Not Available | Positive | 2387041 - 2387595 | 19082.0 |
| inositol monophosphatase | BK659_10565 | Not Available | Negative | 2387841 - 2388659 | 29751.5 |
| trna (cytosine(32)/uridine(32)-2'-o)-methyltransferase trmj | BK659_10570 | Not Available | Positive | 2388806 - 2389576 | 28352.1 |
| serine o-acetyltransferase | BK659_10575 | Not Available | Positive | 2389579 - 2390355 | 27822.5 |
| fe-s cluster assembly transcriptional regulator iscr | BK659_10580 | Not Available | Positive | 2390607 - 2391098 | 17929.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
