Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase | BK659_10280 | Not Available | Positive | 2322055 - 2322966 | 33222.6 |
| deoxyribonuclease | BK659_10285 | Not Available | Negative | 2323092 - 2324600 | 55188.3 |
| porin | BK659_10290 | Not Available | Negative | 2324755 - 2326023 | 45885.9 |
| hypothetical protein | BK659_10295 | Not Available | Negative | 2326270 - 2326494 | 7758.04 |
| two-component sensor histidine kinase | BK659_10300 | Not Available | Negative | 2326765 - 2328147 | 51011.8 |
| dna-binding response regulator | BK659_10305 | Not Available | Negative | 2328119 - 2328796 | 25184.5 |
| acriflavine resistance protein b | BK659_10310 | Not Available | Negative | 2328805 - 2331900 | 110190.0 |
| efflux transporter periplasmic adaptor subunit | BK659_10315 | Not Available | Negative | 2331897 - 2333066 | 41570.1 |
| hypothetical protein | BK659_10320 | Not Available | Positive | 2333278 - 2333523 | 8465.83 |
| amino acid abc transporter substrate-binding protein | BK659_10325 | Not Available | Positive | 2333736 - 2334878 | 41240.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
