Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK659_09975 | Not Available | Negative | 2255109 - 2255693 | 20632.6 |
| 16s rrna methyltransferase | BK659_09980 | Not Available | Negative | 2255945 - 2256943 | 35851.1 |
| glycerate dehydrogenase | BK659_09985 | Not Available | Negative | 2256977 - 2257942 | 34257.4 |
| lysine transporter lyse | BK659_09990 | Not Available | Positive | 2258038 - 2258667 | 22658.0 |
| long-chain fatty acid--coa ligase | BK659_09995 | Not Available | Positive | 2258860 - 2260542 | 62111.0 |
| adhesin | BK659_10000 | Not Available | Positive | 2260880 - 2262769 | 67651.9 |
| outer membrane lipoprotein-sorting protein | BK659_10005 | Not Available | Positive | 2262798 - 2264162 | 50718.9 |
| helix-turn-helix transcriptional regulator | BK659_10010 | Not Available | Positive | 2264348 - 2267086 | 102497.0 |
| lysr family transcriptional regulator | BK659_10015 | Not Available | Negative | 2267112 - 2268026 | 33673.6 |
| aldehyde dehydrogenase puuc | BK659_10020 | Not Available | Positive | 2268272 - 2269762 | 53521.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
