Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine abc transporter atp-binding protein | BK659_09875 | Not Available | Negative | 2235656 - 2236378 | 26237.0 |
| amino acid abc transporter | BK659_09880 | Not Available | Negative | 2236371 - 2237021 | 23768.8 |
| abc transporter permease | BK659_09885 | Not Available | Negative | 2237031 - 2237696 | 24496.7 |
| amino acid abc transporter substrate-binding protein | BK659_09890 | Not Available | Negative | 2237804 - 2238622 | 29119.6 |
| arac family transcriptional regulator | BK659_09895 | Not Available | Negative | 2238903 - 2239649 | 27385.0 |
| fad/nad(p)-binding oxidoreductase | BK659_09900 | Not Available | Negative | 2239678 - 2240946 | 44877.3 |
| d-amino-acid oxidase | BK659_09905 | Not Available | Negative | 2241176 - 2242291 | 39591.6 |
| hydroxyproline-2-epimerase | BK659_09910 | Not Available | Negative | 2242288 - 2243223 | 33826.9 |
| gntr family transcriptional regulator | BK659_09915 | Not Available | Negative | 2243330 - 2244010 | 25427.7 |
| hypothetical protein | BK659_09920 | Not Available | Positive | 2244164 - 2244451 | 10838.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
