Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | BK659_09825 | Not Available | Negative | 2225543 - 2226529 | 36129.8 |
| tigr01777 family protein | BK659_09830 | Not Available | Positive | 2226726 - 2227628 | 33018.3 |
| ferrochelatase | BK659_09835 | Not Available | Positive | 2227642 - 2228664 | 38033.9 |
| uracil permease | BK659_09840 | Not Available | Negative | 2228796 - 2230070 | 44198.7 |
| uracil phosphoribosyltransferase | BK659_09845 | Not Available | Negative | 2230073 - 2230711 | 22921.2 |
| hypoxanthine-guanine phosphoribosyltransferase | BK659_09850 | Not Available | Positive | 2230877 - 2231434 | 20666.8 |
| cupin | BK659_09855 | Not Available | Positive | 2231438 - 2231911 | 17314.6 |
| aldehyde dehydrogenase (nadp(+)) | BK659_09860 | Not Available | Negative | 2231928 - 2233520 | 56085.4 |
| dihydrodipicolinate synthase family protein | BK659_09865 | Not Available | Negative | 2233577 - 2234494 | 33038.7 |
| hypothetical protein | BK659_09870 | Not Available | Negative | 2234591 - 2235628 | 36880.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
