Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-ketoglutarate-dependent dioxygenase alkb | BK659_09470 | Not Available | Positive | 2157064 - 2157741 | 24924.8 |
| bifunctional transcriptional activator/dna repair enzyme protein ada | BK659_09475 | Not Available | Positive | 2157970 - 2159031 | 38444.6 |
| arac family transcriptional regulator | BK659_09480 | Not Available | Negative | 2159238 - 2159696 | 16780.8 |
| alcohol dehydrogenase | BK659_09485 | Not Available | Negative | 2159715 - 2160698 | 34208.1 |
| 2-nitropropane dioxygenase | BK659_09490 | Not Available | Positive | 2160898 - 2161962 | 37870.7 |
| molybdate abc transporter substrate-binding protein | BK659_09495 | Not Available | Positive | 2162283 - 2163050 | 27049.2 |
| molybdenum abc transporter permease subunit | BK659_09500 | Not Available | Positive | 2163051 - 2163731 | 24236.2 |
| molybdenum abc transporter atp-binding protein | BK659_09505 | Not Available | Positive | 2163735 - 2164823 | 39731.1 |
| abc transporter atp-binding protein | BK659_09510 | Not Available | Positive | 2165005 - 2166657 | 59850.1 |
| hypothetical protein | BK659_09515 | Not Available | Positive | 2166746 - 2166970 | 8420.06 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
