Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | BK659_09370 | Not Available | Positive | 2138237 - 2139547 | 47315.8 |
| nadp-dependent oxidoreductase | BK659_09375 | Not Available | Positive | 2139742 - 2140749 | 37006.7 |
| chemotaxis protein | BK659_09380 | Not Available | Positive | 2140888 - 2141769 | 32439.8 |
| 4-hydroxyphenylpyruvate dioxygenase | BK659_09385 | Not Available | Negative | 2141894 - 2142970 | 40320.4 |
| eama family transporter | BK659_09390 | Not Available | Negative | 2143213 - 2144163 | 33905.5 |
| lysr family transcriptional regulator | BK659_09395 | Not Available | Positive | 2144254 - 2145126 | 32235.9 |
| cyclic diguanylate phosphodiesterase | BK659_09400 | Not Available | Positive | 2145260 - 2146795 | 56919.8 |
| transcriptional regulator | BK659_09405 | Not Available | Positive | 2147042 - 2147404 | 13477.2 |
| duf4946 domain-containing protein | BK659_09410 | Not Available | Negative | 2147602 - 2148138 | 19630.4 |
| lactoylglutathione lyase | BK659_09415 | Not Available | Positive | 2148277 - 2148798 | 19623.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
