Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain alpha-keto acid dehydrogenase subunit e2 | BK659_09070 | Not Available | Positive | 2063135 - 2064412 | 45195.8 |
| dihydrolipoyl dehydrogenase | BK659_09075 | Not Available | Positive | 2064431 - 2065816 | 48690.0 |
| branched chain amino acid aminotransferase | BK659_09080 | Not Available | Positive | 2066098 - 2067117 | 37025.3 |
| lysr family transcriptional regulator | BK659_09085 | Not Available | Negative | 2067282 - 2068196 | 33622.5 |
| lysine transporter lyse | BK659_09090 | Not Available | Positive | 2068302 - 2068910 | 21470.2 |
| hypothetical protein | BK659_09095 | Not Available | Positive | 2069266 - 2069601 | 12083.3 |
| cation transporter | BK659_09100 | Not Available | Negative | 2069635 - 2070567 | 32898.6 |
| transcriptional regulator | BK659_09105 | Not Available | Negative | 2070582 - 2070857 | 10250.2 |
| mfs transporter | BK659_09110 | Not Available | Positive | 2071063 - 2072367 | 46607.2 |
| lipase | BK659_09115 | Not Available | Negative | 2072417 - 2073640 | 44723.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
