Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK659_09020 | Not Available | Negative | 2052957 - 2053493 | 19401.4 |
| methyl-accepting chemotaxis protein | BK659_09025 | Not Available | Positive | 2053909 - 2055903 | 71675.4 |
| hypothetical protein | BK659_09030 | Not Available | Negative | 2056137 - 2056826 | 25166.6 |
| metal-binding protein | BK659_09035 | Not Available | Positive | 2057208 - 2057651 | 15597.0 |
| hypothetical protein | BK659_09040 | Not Available | Positive | 2057651 - 2058085 | 16216.2 |
| alpha/beta hydrolase | BK659_09045 | Not Available | Positive | 2058164 - 2059189 | 37649.2 |
| hydroxyacid dehydrogenase | BK659_09050 | Not Available | Positive | 2059204 - 2060157 | 34777.9 |
| arsr family transcriptional regulator | BK659_09055 | Not Available | Negative | 2060165 - 2060653 | 18109.2 |
| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha | BK659_09060 | Not Available | Positive | 2060839 - 2062074 | 45143.9 |
| alpha-ketoacid dehydrogenase subunit beta | BK659_09065 | Not Available | Positive | 2062076 - 2063134 | 38601.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
