Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | BK659_08920 | Not Available | Positive | 2028137 - 2029039 | 33535.9 |
| hypothetical protein | BK659_08925 | Not Available | Positive | 2029600 - 2029974 | 13382.9 |
| xanthine permease xanp | BK659_08930 | Not Available | Positive | 2030301 - 2031773 | 51728.7 |
| hypothetical protein | BK659_08935 | Not Available | Positive | 2031832 - 2032305 | 16828.5 |
| nitrilase | BK659_08940 | Not Available | Negative | 2032328 - 2033248 | 32836.8 |
| lysr family transcriptional regulator | BK659_08945 | Not Available | Positive | 2033334 - 2034263 | 33475.6 |
| hypothetical protein | BK659_08950 | Not Available | Negative | 2034424 - 2034675 | 9502.33 |
| hypothetical protein | BK659_08955 | Not Available | Positive | 2034841 - 2035158 | 11583.8 |
| lactate dehydrogenase | BK659_08960 | Not Available | Negative | 2035363 - 2036403 | 36274.5 |
| hypothetical protein | BK659_08965 | Not Available | Positive | 2036625 - 2041496 | 180392.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
