Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide abc transporter substrate-binding protein | BK659_08870 | Not Available | Positive | 2016132 - 2017694 | 57273.2 |
| peptide abc transporter | BK659_08875 | Not Available | Positive | 2017705 - 2018646 | 33805.6 |
| peptide abc transporter permease | BK659_08880 | Not Available | Positive | 2018751 - 2019503 | 27203.0 |
| peptide abc transporter atp-binding protein | BK659_08885 | Not Available | Positive | 2019506 - 2021155 | 60037.4 |
| porin | BK659_08890 | Not Available | Positive | 2021260 - 2022534 | 47048.2 |
| cell division protein zape | BK659_08895 | Not Available | Negative | 2022748 - 2023866 | 42080.2 |
| ketosteroid isomerase | BK659_08900 | Not Available | Negative | 2024686 - 2025027 | 12291.5 |
| transcriptional regulator | BK659_08905 | Not Available | Negative | 2025079 - 2025795 | 26357.9 |
| agmatinase | BK659_08910 | Not Available | Negative | 2025971 - 2026930 | 34618.8 |
| spermidine/putrescine abc transporter substrate-binding protein potf | BK659_08915 | Not Available | Negative | 2026944 - 2028035 | 39695.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
