Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine/lysine/arginine/ornithine abc transporter atp-binding protein | BK659_08670 | Not Available | Negative | 1972869 - 1973630 | 27930.9 |
| amino acid abc transporter permease | BK659_08675 | Not Available | Negative | 1973707 - 1974417 | 26341.7 |
| amino acid abc transporter permease | BK659_08680 | Not Available | Negative | 1974414 - 1975175 | 27887.8 |
| abc transporter substrate-binding protein | BK659_08685 | Not Available | Negative | 1975215 - 1975994 | 28219.7 |
| crotonase | BK659_08690 | Not Available | Positive | 1976453 - 1977559 | 40619.5 |
| acyl-coa dehydrogenase | BK659_08695 | Not Available | Positive | 1977563 - 1978714 | 41583.9 |
| enoyl-coa hydratase | BK659_08700 | Not Available | Negative | 1978822 - 1979595 | 27624.8 |
| acyl-coa dehydrogenase | BK659_08705 | Not Available | Negative | 1979610 - 1980737 | 40653.6 |
| acetyl-coa acetyltransferase | BK659_08710 | Not Available | Negative | 1980881 - 1982074 | 41254.1 |
| 3-hydroxyacyl-coa dehydrogenase | BK659_08715 | Not Available | Negative | 1982087 - 1982848 | 25799.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
