Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug transporter | BK659_08465 | Not Available | Negative | 1925022 - 1926422 | 50003.1 |
| dna-binding response regulator | BK659_08470 | Not Available | Negative | 1926527 - 1927219 | 25233.3 |
| dna-binding response regulator | BK659_08475 | Not Available | Positive | 1927339 - 1928031 | 25824.0 |
| two-component sensor histidine kinase | BK659_08480 | Not Available | Positive | 1928009 - 1929382 | 50735.8 |
| histidine phosphatase family protein | BK659_08485 | Not Available | Positive | 1929694 - 1930359 | 23866.6 |
| 4-amino-4-deoxy-l-arabinose lipid a transferase | BK659_08490 | Not Available | Positive | 1930735 - 1932384 | 62116.1 |
| dolichyl-phosphate-mannose--protein mannosyltransferase | BK659_08495 | Not Available | Positive | 1932539 - 1934074 | 57893.8 |
| iron abc transporter substrate-binding protein | BK659_08500 | Not Available | Positive | 1934395 - 1935411 | 35822.6 |
| iron abc transporter permease | BK659_08505 | Not Available | Positive | 1935461 - 1937029 | 55937.2 |
| abc transporter atp-binding protein | BK659_08510 | Not Available | Positive | 1937026 - 1938132 | 39130.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
