Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK659_08415 | Not Available | Positive | 1911960 - 1912190 | 8773.35 |
| hypothetical protein | BK659_08420 | Not Available | Negative | 1912452 - 1912784 | 12013.5 |
| hypothetical protein | BK659_08425 | Not Available | Negative | 1912795 - 1912989 | 7335.94 |
| hypothetical protein | BK659_08430 | Not Available | Negative | 1913210 - 1913590 | 14219.0 |
| type iv secretion protein rhs | BK659_08435 | Not Available | Negative | 1913583 - 1918253 | 175287.0 |
| hypothetical protein | BK659_08440 | Not Available | Positive | 1918551 - 1918742 | 7570.82 |
| rna signal recognition particle | BK659_08445 | Not Available | Negative | 1918789 - 1919142 | 13132.7 |
| two-component sensor histidine kinase | BK659_08450 | Not Available | Negative | 1919439 - 1920731 | 48621.8 |
| acriflavine resistance protein b | BK659_08455 | Not Available | Negative | 1920758 - 1923835 | 110083.0 |
| efflux transporter periplasmic adaptor subunit | BK659_08460 | Not Available | Negative | 1923832 - 1925025 | 42121.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
