Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK659_08355 | Not Available | Positive | 1900328 - 1901206 | 32469.6 |
| hypothetical protein | BK659_08360 | Not Available | Negative | 1901208 - 1901399 | 6668.51 |
| polysaccharide deacetylase | BK659_08370 | Not Available | Positive | 1901864 - 1902682 | 30800.0 |
| gtp-binding protein | BK659_08375 | Not Available | Positive | 1902679 - 1903953 | 46667.6 |
| serine hydrolase | BK659_08380 | Not Available | Positive | 1903962 - 1906292 | 82786.3 |
| universal stress protein uspa | BK659_08385 | Not Available | Negative | 1906372 - 1907283 | 33737.7 |
| crp/fnr family transcriptional regulator | BK659_08395 | Not Available | Positive | 1909645 - 1910397 | 28027.5 |
| universal stress protein | BK659_08400 | Not Available | Negative | 1910456 - 1911376 | 34247.6 |
| hypothetical protein | BK659_08405 | Not Available | Positive | 1911434 - 1911670 | 9183.03 |
| hypothetical protein | BK659_08410 | Not Available | Negative | 1911722 - 1911928 | 7618.35 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
