Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnd transporter | BK659_08300 | Not Available | Positive | 1885450 - 1887984 | 92559.7 |
| acyl-coa dehydrogenase | BK659_08305 | Not Available | Positive | 1887992 - 1889770 | 63747.2 |
| type i glyceraldehyde-3-phosphate dehydrogenase | BK659_08310 | Not Available | Positive | 1889886 - 1890899 | 36873.1 |
| mfs transporter | BK659_08315 | Not Available | Positive | 1890909 - 1892129 | 43585.5 |
| ggdef domain-containing protein | BK659_08320 | Not Available | Positive | 1892232 - 1893296 | 39766.5 |
| cytochrome c552 | BK659_08325 | Not Available | Negative | 1893333 - 1893971 | 22105.3 |
| oxidase | BK659_08330 | Not Available | Negative | 1893983 - 1895224 | 45071.2 |
| atpase | BK659_08335 | Not Available | Positive | 1895590 - 1896258 | 24142.7 |
| yfce family phosphodiesterase | BK659_08340 | Not Available | Positive | 1896571 - 1897029 | 16789.3 |
| hypothetical protein | BK659_08345 | Not Available | Positive | 1898369 - 1898704 | 12390.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
