Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase accessory protein fdhe | BK659_08200 | Not Available | Positive | 1862471 - 1863397 | 33690.0 |
| l-seryl-trna(sec) selenium transferase | BK659_08205 | Not Available | Positive | 1863618 - 1865042 | 51387.7 |
| selenocysteine-specific translation elongation factor | BK659_08210 | Not Available | Positive | 1865039 - 1866958 | 70497.2 |
| Trna-sec | Not Available | Not Available | Positive | 1866965 - 1867060 | Not Available |
| magnesium transporter | BK659_08220 | Not Available | Negative | 1867083 - 1868102 | 37108.1 |
| hypothetical protein | BK659_08225 | Not Available | Positive | 1868915 - 1869913 | 35790.7 |
| hypothetical protein | BK659_08230 | Not Available | Negative | 1869943 - 1870602 | 23946.4 |
| arac family transcriptional regulator | BK659_08235 | Not Available | Positive | 1870872 - 1871855 | 36672.2 |
| quinone oxidoreductase | BK659_08240 | Not Available | Positive | 1872054 - 1873034 | 34924.1 |
| taurine dioxygenase | BK659_08245 | Not Available | Positive | 1873049 - 1873897 | 32111.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
