Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter | BK659_08150 | Not Available | Negative | 1851355 - 1852014 | 23532.0 |
| amino acid abc transporter | BK659_08155 | Not Available | Negative | 1852090 - 1852926 | 30405.9 |
| fad-binding oxidoreductase | BK659_08160 | Not Available | Negative | 1853055 - 1854431 | 49270.0 |
| histidine ammonia-lyase | BK659_08165 | Not Available | Negative | 1854684 - 1856213 | 54173.2 |
| hypothetical protein | BK659_08170 | Not Available | Positive | 1856258 - 1856452 | 7428.85 |
| oxidoreductase | BK659_08175 | Not Available | Positive | 1856632 - 1857597 | 35595.2 |
| sulfate abc transporter substrate-binding protein | BK659_08180 | Not Available | Positive | 1857801 - 1858391 | 21415.6 |
| formate dehydrogenase-n subunit alpha | BK659_08185 | Not Available | Positive | 1858440 - 1860866 | 90108.9 |
| formate dehydrogenase subunit beta | BK659_08190 | Not Available | Positive | 1860866 - 1861816 | 34278.8 |
| formate dehydrogenase subunit gamma | BK659_08195 | Not Available | Positive | 1861813 - 1862466 | 25172.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
