Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s cluster assembly protein sufd | BK659_08100 | Not Available | Positive | 1841539 - 1842849 | 46996.0 |
| cysteine sulfinate desulfinase | BK659_08105 | Not Available | Positive | 1842846 - 1844120 | 45835.4 |
| suf system nifu family fe-s cluster assembly protein | BK659_08110 | Not Available | Positive | 1844117 - 1844575 | 16521.8 |
| putative fe-s cluster assembly protein suft | BK659_08115 | Not Available | Positive | 1844879 - 1845430 | 19738.8 |
| thioredoxin | BK659_08120 | Not Available | Positive | 1845455 - 1847443 | 74586.0 |
| alkylhydroperoxidase | BK659_08125 | Not Available | Positive | 1847486 - 1847842 | 12568.8 |
| histidine utilization repressor | BK659_08130 | Not Available | Negative | 1847876 - 1848613 | 27530.2 |
| histidinol-phosphate transaminase | BK659_08135 | Not Available | Negative | 1848613 - 1849749 | 40822.1 |
| atp-binding protein | BK659_08140 | Not Available | Negative | 1849746 - 1850585 | 31058.6 |
| amino acid abc transporter | BK659_08145 | Not Available | Negative | 1850687 - 1851358 | 24229.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
